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java.lang.Object org.simBio.core.Component org.simBio.core.Parameter org.simBio.core.Composite org.simBio.core.Reactor org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel
public class CfChannel
calculate current component of Na, K, Ca, and Cl ion according to the constant field theory.
CfChannel
Field Summary | |
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double |
Cm
membrane capacitance [pF] |
Node |
constantFieldCa
Ca2+ flux calculated by constant field theory [mM] |
Node |
constantFieldCl
Cl- flux calculated by constant field theory [mM] |
Node |
constantFieldK
K+ flux calculated by constant field theory [mM] |
Node |
constantFieldNa
Na+ flux calculated by constant field theory [mM] |
double |
permeabilityCa
channel permeability for Ca2+ |
double |
permeabilityCl
channel permeability for Cl- [pA/pF/mM] |
double |
permeabilityK
channel permeability for K+ [pA/pF/mM][pA/pF/mM] |
double |
permeabilityNa
channel permeability for Na+ [pA/pF/mM] |
double |
pOpen
open probability |
Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter |
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cCl, CCl, currentCl |
Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter |
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cCa, CCa, cK, CK, cNa, CNa, current, currentCa, currentK, currentNa, total |
Fields inherited from class org.simBio.core.Parameter |
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value |
Constructor Summary | |
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CfChannel()
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Method Summary | |
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protected void |
calculate(double t)
add Cl current to Compartment. |
Methods inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter |
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prepare |
Methods inherited from class org.simBio.core.Composite |
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accept, getLink, getNode, getNodesIterator, getNodesSize |
Methods inherited from class org.simBio.core.Parameter |
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addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField |
Methods inherited from class org.simBio.core.Component |
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addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Methods inherited from interface org.simBio.core.Node |
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addDydt, addValue, getValue, setValue |
Field Detail |
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public double Cm
public Node constantFieldCl
public double permeabilityCl
public Node constantFieldCa
public Node constantFieldK
public Node constantFieldNa
public double permeabilityNa
public double permeabilityK
public double permeabilityCa
public double pOpen
Constructor Detail |
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public CfChannel()
Method Detail |
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protected void calculate(double t)
MembraneTransporter
calculate
in class MembraneTransporter
t
- timeCfChannel.calculate(double)
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