org.simBio.bio.terashima_et_al_2006.current.cf
Class ICFTR

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter
                      org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter
                          org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel
                              org.simBio.bio.terashima_et_al_2006.current.cf.ICFTR

All Implemented Interfaces:

Node

public class ICFTR
extends CfChannel

Cystic fibrosis transmembrane conductance regulator Cl- channel current.

Version:

$Id: ICFTR.java,v 1.2 2006/06/14 02:22:47 atakeuchi Exp $

Author:

Keisuke Terashima

See Also:

explanation (Japanese, WORD doc)

Field Summary

Node	ATP concentration of intracellular ATP [mM]
Node	cAMP concentration of intracellular cAMP [mM]
Node	cPKA fraction of cAMP-activated PKA
Node	Isoprenaline concentration of extracellular isoprenaline [uM]
double	kd dissociation constant of cAMP for PKA activation [mM]
double	n Hill coefficient
Node	POpen open probability

Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel

Cm, constantFieldCa, constantFieldCl, constantFieldK, constantFieldNa, permeabilityCa, permeabilityCl, permeabilityK, permeabilityNa, pOpen

Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter

cCl, CCl, currentCl

Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter

cCa, CCa, cK, CK, cNa, CNa, current, currentCa, currentK, currentNa, total

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

ICFTR()

Method Summary

protected void

calculate(double t) add Cl current to Compartment.

Methods inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter

prepare

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

ATP

public Node ATP

concentration of intracellular ATP [mM]

kd

public double kd

dissociation constant of cAMP for PKA activation [mM]

n

public double n

Hill coefficient

POpen

public Node POpen

open probability

cAMP

public Node cAMP

concentration of intracellular cAMP [mM]

cPKA

public Node cPKA

fraction of cAMP-activated PKA

Isoprenaline

public Node Isoprenaline

concentration of extracellular isoprenaline [uM]

Constructor Detail

ICFTR

public ICFTR()

Method Detail

calculate

protected void calculate(double t)

Description copied from class: MembraneTransporter

add Cl current to Compartment.

Overrides:

calculate in class CfChannel

Parameters:

t - time

See Also:

CfChannel.calculate(double)