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java.lang.Object org.simBio.core.Component org.simBio.core.Parameter org.simBio.core.Composite org.simBio.core.Reactor org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel org.simBio.bio.kuzumoto_et_al_2007.current.cf.IKs
public class IKs
Delayed rectifier K+ current, slow component (pA). Ca2+ gate became a 3-state model. Phosphorylation is incorporated.
IKs
,
IKs
Field Summary | |
---|---|
Node |
Ca
intracellular Ca2+ concentration |
Node |
gate1
the open probability of voltage-dependent gate |
Node |
gate2
the open probability of [Ca2+]i-dependent gate |
Node |
gateC2
the C2 state probability of [Ca2+]i-dependent gate |
Node |
KCNQ1
|
Node |
KCNQ1free
|
Node |
KCNQ1p
|
Node |
KCNQ1p_ratio
|
double |
permeabilityK0
|
Component |
Phosphorylation
|
Node |
PKA
|
double |
PKAtot
|
Node |
POpen
|
double |
relativePNa
the permeability ratio of K+ and Na+ |
Node |
Vm
Membrane Potential (mV) |
double |
Vshift
|
Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel |
---|
Cm, constantFieldCa, constantFieldCl, constantFieldK, constantFieldNa, permeabilityCa, permeabilityCl, permeabilityK, permeabilityNa, pOpen |
Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter |
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cCl, CCl, currentCl |
Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter |
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cCa, CCa, cK, CK, cNa, CNa, current, currentCa, currentK, currentNa, total |
Fields inherited from class org.simBio.core.Parameter |
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value |
Constructor Summary | |
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IKs()
|
Method Summary | |
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protected void |
calculate(double t)
add Cl current to Compartment. |
protected void |
prepare()
initialization for IKs. |
Methods inherited from class org.simBio.core.Composite |
---|
accept, getLink, getNode, getNodesIterator, getNodesSize |
Methods inherited from class org.simBio.core.Parameter |
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addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField |
Methods inherited from class org.simBio.core.Component |
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addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Methods inherited from interface org.simBio.core.Node |
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addDydt, addValue, getValue, setValue |
Field Detail |
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public Node gate1
public Node gate2
public Node gateC2
public Node Ca
public Node Vm
public double Vshift
public double permeabilityK0
public double relativePNa
public Component Phosphorylation
public Node PKA
public double PKAtot
public Node KCNQ1
public Node KCNQ1p
public Node KCNQ1free
public Node POpen
public Node KCNQ1p_ratio
Constructor Detail |
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public IKs()
Method Detail |
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protected void prepare()
prepare
in class MembraneTransporter
Component.prepare()
protected void calculate(double t)
MembraneTransporter
calculate
in class CfChannel
t
- timeCfChannel.calculate(double)
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