org.simBio.bio.sarai_noma_2004.fourState
Class MonteCarlo

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.sarai_noma_2004.fourState.ODE
                      org.simBio.bio.sarai_noma_2004.fourState.MonteCarlo

All Implemented Interfaces:

Node

Direct Known Subclasses:

NaChannel

public abstract class MonteCarlo
extends ODE

Version:

$Revision: 1.1 $ Created on 2003/10/30

Author:

Nobuaki Sarai

Field Summary

Fields inherited from class org.simBio.bio.sarai_noma_2004.fourState.ODE

pAI, pAP, pRP

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

MonteCarlo()

Method Summary

protected void	calculate(double t) calculate single channels' state transition
protected void	prepare() determine initial state of single channels Method determineInitialState.
protected void	setLinks() set arias for gates

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Constructor Detail

MonteCarlo

public MonteCarlo()

Method Detail

setLinks

protected void setLinks()

Description copied from class: ODE

set arias for gates

Overrides:

setLinks in class ODE

See Also:

Component.setLinks()

prepare

protected void prepare()

determine initial state of single channels Method determineInitialState.

Overrides:

prepare in class ODE

See Also:

Component.prepare()

calculate

protected void calculate(double t)

calculate single channels' state transition

Overrides:

calculate in class ODE

Parameters:

t -