org.simBio.bio.oka_et_al_2006.structure
Class GapJunction

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.Compartment
                      org.simBio.bio.oka_et_al_2006.structure.GapJunction

All Implemented Interfaces:

Node

Direct Known Subclasses:

GapJunctionK

public class GapJunction
extends Compartment

Gap junction model.

Version:

$Revision: 1.2 $

Author:

Chiaki Oka

See Also:

GapJunction.ja.doc (Japanese, WORD doc)

Field Summary

Node	Cm1 membrane capacitance of cell #1 (pF)
Node	Cm2 membrane capacitance of cell #2 (pS)
Node	conductance conductance of gapjunction (nS)
Node	Vm1 membrane potential of cell #1 (mV)
Node	Vm2 membrane potential of cell #2 (mV)

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

GapJunction()

Method Summary

protected void

calculate(double t) Calculate the gap junctional current (pA)

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

Vm1

public Node Vm1

membrane potential of cell #1 (mV)

Cm1

public Node Cm1

membrane capacitance of cell #1 (pF)

Vm2

public Node Vm2

membrane potential of cell #2 (mV)

Cm2

public Node Cm2

membrane capacitance of cell #2 (pS)

conductance

public Node conductance

conductance of gapjunction (nS)

Constructor Detail

GapJunction

public GapJunction()

Method Detail

calculate

protected void calculate(double t)

Calculate the gap junctional current (pA)

Overrides:

calculate in class Compartment

Parameters:

t - time

See Also:

Reactor.calculate(double)