org.simBio.bio.kuzumoto_et_al_2007.contraction
Class Troponinmit

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.kuzumoto_et_al_2007.contraction.Troponin
                      org.simBio.bio.kuzumoto_et_al_2007.contraction.Troponinmit

All Implemented Interfaces:

Node

public class Troponinmit
extends Troponin

Troponin state transition of Cardiac Muscle Model by Negroni and Lascano. ATP- and Pi-dependency are incorporated.

Version:

$Id: Troponinmit.java,v 1.1 2007/12/15 07:21:54 nsarai Exp $

Author:

SAITO Ryuta

See Also:

Kuzumoto et al, 2007., Negroni JA and Lascano EC, J Mol Cell Cardiol 28: 915-929, 1996.

Field Summary

Node	ADP
double	KmATP
double	KmPi
Node	Pi

Fields inherited from class org.simBio.bio.kuzumoto_et_al_2007.contraction.Troponin

ATP, BIAS, Ca, CaTotal, dATP, dXdt, dXdtFactor, L, La, r1, r2, T, TCa, TCaCB, TCB, Tt, Y1, Y2, Y3, Y4, Yd, Z1, Z2, Z3

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

Troponinmit()

Method Summary

protected void

calculate(double t) write equations here, and calculate dy over dt.

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

Pi

public Node Pi

ADP

public Node ADP

KmPi

public double KmPi

KmATP

public double KmATP

Constructor Detail

Troponinmit

public Troponinmit()

Method Detail

calculate

protected void calculate(double t)

Description copied from class: Reactor

write equations here, and calculate dy over dt.
計算中に呼び出される。 計算式を記載する。dy/dtをここで計算する。

Overrides:

calculate in class Troponin

Parameters:

t - elapsed time (ms)