org.simBio.sim.analyzer.graph.simple
Class Viewer

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Analyzer
                  org.simBio.sim.analyzer.graph.simple.Viewer

All Implemented Interfaces:

Node, IViewer, ICanvas

Direct Known Subclasses:

RateGraph, RateGraph_KA

public class Viewer
extends Analyzer
implements ICanvas, IViewer

graph viewer.

Version:

$Log: Viewer.java,v $ Revision 1.1 2005/11/01 06:32:39 mikaelwing First version of simBio hosted on sourceforge, version 0.3 Revision 1.1 2005/09/12 04:57:07 sarai rearrenge folder structure as a Maven style Revision 1.3 2005/08/23 03:06:52 sarai implements IViewer to work with new GUI.

Author:

Nobuaki Sarai

Field Summary

double	referenceHeight
double	referenceWidth

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

Viewer()

Method Summary

protected void	analyze(double t) do nothing
void	drawBar(int x, int y, int width, int height, int c)
void	drawPoint(int x, int y, int size, int c)
double	getScaleHeight() scaling factor = reference height (0.01 mm) / physical height (pixel)
double	getScaleWidth() scaling factor = reference width (0.01 mm) / physical width (pixel)
double	getWHratio()
void	paintComponent(java.awt.Graphics graphic) Viewerの画面用描画を行う.
void	plotAxises(Axis XA, Axis YA) plot axses and grids
void	printComponent(java.awt.Graphics graphic)
protected void	quit() dispose graphics and OnScreen.
void	reset() get graphics and clear.
void	setContainer(java.awt.Container container) Sets the container.
void	setContainer(javax.swing.JPanel panel)
void	setFileName(java.lang.String string) XMLファイル名を設定する.
protected void	setLinks() When there are no container, construct OnScreen, and clear.
void	setPrintableRect(java.awt.Rectangle rectPrintableArea)
void	setPrintRect(java.awt.Rectangle rectImageArea)

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

referenceWidth

public double referenceWidth

referenceHeight

public double referenceHeight

Constructor Detail

Viewer

public Viewer()

Method Detail

setContainer

public void setContainer(java.awt.Container container)

Sets the container.

Specified by:

setContainer in interface IViewer

Parameters:

container - The container to set

reset

public void reset()

get graphics and clear.

Specified by:

reset in interface ICanvas

setLinks

protected void setLinks()

When there are no container, construct OnScreen, and clear.

Overrides:

setLinks in class Component

See Also:

OnScreen, Component.setLinks()

quit

protected void quit()

dispose graphics and OnScreen.

Overrides:

quit in class Component

See Also:

OnScreen, Component.quit()

analyze

protected void analyze(double t)

do nothing

Specified by:

analyze in class Analyzer

Parameters:

t - time

See Also:

Analyzer.analyze(double)

getScaleWidth

public double getScaleWidth()

scaling factor = reference width (0.01 mm) / physical width (pixel)

Specified by:

getScaleWidth in interface ICanvas

Returns:

reference width / physical width

getScaleHeight

public double getScaleHeight()

scaling factor = reference height (0.01 mm) / physical height (pixel)

Specified by:

getScaleHeight in interface ICanvas

Returns:

reference height / physical height

plotAxises

public void plotAxises(Axis XA,
                       Axis YA)

plot axses and grids

Specified by:

plotAxises in interface ICanvas

Parameters:

XA - x axis

YA - y axis

drawBar

public void drawBar(int x,
                    int y,
                    int width,
                    int height,
                    int c)

Specified by:

drawBar in interface ICanvas

drawPoint

public void drawPoint(int x,
                      int y,
                      int size,
                      int c)

Specified by:

drawPoint in interface ICanvas

getWHratio

public double getWHratio()

Specified by:

getWHratio in interface IViewer

Returns:

referenceWidth / target.referenceHeight

See Also:

IViewer.getWHratio()

setFileName

public void setFileName(java.lang.String string)

XMLファイル名を設定する.

Specified by:

setFileName in interface IViewer

Parameters:

string - XMLファイル名

paintComponent

public void paintComponent(java.awt.Graphics graphic)

Viewerの画面用描画を行う.

Specified by:

paintComponent in interface IViewer

Parameters:

graphic - 描画対象のGraphics

printComponent

public void printComponent(java.awt.Graphics graphic)

Specified by:

printComponent in interface IViewer

setPrintRect

public void setPrintRect(java.awt.Rectangle rectImageArea)

Specified by:

setPrintRect in interface IViewer

setPrintableRect

public void setPrintableRect(java.awt.Rectangle rectPrintableArea)

Specified by:

setPrintableRect in interface IViewer

setContainer

public void setContainer(javax.swing.JPanel panel)